cis-Vaccenic acid

Identification

Generic Name
cis-Vaccenic acid
DrugBank Accession Number
DB04801
Background

Not Available

Type
Small Molecule
Groups
Experimental
Structure
Weight
Average: 282.4614
Monoisotopic: 282.255880332
Chemical Formula
C18H34O2
Synonyms
  • (Z)-11-octadecenoic acid
  • (Z)-octadec-11-enoic acid
  • Asclepic acid
  • cis-11-octadecenoic acid
  • cis-octadec-11-enoic acid
  • trans-11-Octadecensäure
External IDs
  • 18:1Z(N-7)

Pharmacology

Indication

Not Available

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Pharmacodynamics

Not Available

Mechanism of action
TargetActionsOrganism
UPeroxisome proliferator-activated receptor deltaNot AvailableHumans
Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism
Not Available
Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects
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Toxicity

Not Available

Pathways
Not Available
Pharmacogenomic Effects/ADRs
Not Available

Interactions

Drug Interactions
This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions
Not Available

Categories

Drug Categories
Chemical TaxonomyProvided by Classyfire
Description
This compound belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms.
Kingdom
Organic compounds
Super Class
Lipids and lipid-like molecules
Class
Fatty Acyls
Sub Class
Fatty acids and conjugates
Direct Parent
Long-chain fatty acids
Alternative Parents
Unsaturated fatty acids / Straight chain fatty acids / Monocarboxylic acids and derivatives / Carboxylic acids / Organic oxides / Hydrocarbon derivatives / Carbonyl compounds
Substituents
Aliphatic acyclic compound / Carbonyl group / Carboxylic acid / Carboxylic acid derivative / Hydrocarbon derivative / Long-chain fatty acid / Monocarboxylic acid or derivatives / Organic oxide / Organic oxygen compound / Organooxygen compound
Molecular Framework
Aliphatic acyclic compounds
External Descriptors
vaccenic acid (CHEBI:50464) / Unsaturated fatty acids (LMFA01030076)
Affected organisms
Not Available

Chemical Identifiers

UNII
400K7322UW
CAS number
506-17-2
InChI Key
UWHZIFQPPBDJPM-FPLPWBNLSA-N
InChI
InChI=1S/C18H34O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h7-8H,2-6,9-17H2,1H3,(H,19,20)/b8-7-
IUPAC Name
(11Z)-octadec-11-enoic acid
SMILES
CCCCCC\C=C/CCCCCCCCCC(O)=O

References

General References
Not Available
Human Metabolome Database
HMDB0240219
PubChem Compound
5282761
PubChem Substance
46507844
ChemSpider
4445888
ChEBI
50464
ChEMBL
CHEMBL1236642
ZINC
ZINC000014881303
PDBe Ligand
VCA
PDB Entries
2aco / 2awh / 2b50 / 2baw / 4bvm / 5ca6 / 5hj1 / 5n4m / 5n4p / 5n4q
show 7 more

Clinical Trials

Clinical Trials
PhaseStatusPurposeConditionsCount

Pharmacoeconomics

Manufacturers
Not Available
Packagers
Not Available
Dosage Forms
Not Available
Prices
Not Available
Patents
Not Available

Properties

State
Solid
Experimental Properties
Not Available
Predicted Properties
PropertyValueSource
Water Solubility0.000123 mg/mLALOGPS
logP7.67ALOGPS
logP6.78Chemaxon
logS-6.4ALOGPS
pKa (Strongest Acidic)4.95Chemaxon
Physiological Charge-1Chemaxon
Hydrogen Acceptor Count2Chemaxon
Hydrogen Donor Count1Chemaxon
Polar Surface Area37.3 Å2Chemaxon
Rotatable Bond Count15Chemaxon
Refractivity87.4 m3·mol-1Chemaxon
Polarizability37.1 Å3Chemaxon
Number of Rings0Chemaxon
Bioavailability0Chemaxon
Rule of FiveNoChemaxon
Ghose FilterNoChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon
Predicted ADMET Features
PropertyValueProbability
Human Intestinal Absorption+0.9945
Blood Brain Barrier+0.9539
Caco-2 permeable+0.8371
P-glycoprotein substrateNon-substrate0.5962
P-glycoprotein inhibitor INon-inhibitor0.9487
P-glycoprotein inhibitor IINon-inhibitor0.8964
Renal organic cation transporterNon-inhibitor0.9272
CYP450 2C9 substrateNon-substrate0.7643
CYP450 2D6 substrateNon-substrate0.8954
CYP450 3A4 substrateNon-substrate0.6678
CYP450 1A2 substrateInhibitor0.9107
CYP450 2C9 inhibitorNon-inhibitor0.8972
CYP450 2D6 inhibitorNon-inhibitor0.9545
CYP450 2C19 inhibitorNon-inhibitor0.9467
CYP450 3A4 inhibitorNon-inhibitor0.9295
CYP450 inhibitory promiscuityLow CYP Inhibitory Promiscuity0.9349
Ames testNon AMES toxic0.9674
CarcinogenicityNon-carcinogens0.6568
BiodegradationReady biodegradable0.811
Rat acute toxicity1.3991 LD50, mol/kg Not applicable
hERG inhibition (predictor I)Weak inhibitor0.9133
hERG inhibition (predictor II)Non-inhibitor0.9103
ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)
Not Available
Spectra
SpectrumSpectrum TypeSplash Key
Predicted GC-MS Spectrum - GC-MSPredicted GC-MSsplash10-0006-9740000000-12d0456cbe2e20785a59
Mass Spectrum (Electron Ionization)MSsplash10-0apl-9200000000-f39f178414756ab6ad8a
MS/MS Spectrum - Quattro_QQQ 10V, PositiveLC-MS/MSsplash10-001i-0090000000-dee621bf09f57d88e5ed
MS/MS Spectrum - Quattro_QQQ 25V, PositiveLC-MS/MSsplash10-001i-9340000000-654e2ea72d5477e26606
MS/MS Spectrum - Quattro_QQQ 40V, PositiveLC-MS/MSsplash10-0aou-9000000000-413d3363f22e7baf1df7
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-00ls-7690000000-456fa2f1cc23f5df626d
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-001i-0090000000-e712519165236e43dfe0
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-001i-1090000000-5f539d0ec811fd994835
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-05o1-9310000000-72e3abbb94f5c8295288
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-052f-9530000000-167bbfa7dd80be51616c
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-067m-9100000000-c5c8ae2b9481ec43f546
1H NMR Spectrum1D NMRNot Applicable
Predicted 1H NMR Spectrum1D NMRNot Applicable
Predicted 13C NMR Spectrum1D NMRNot Applicable
[1H,13C] 2D NMR Spectrum2D NMRNot Applicable
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-206.6443893
predicted
DarkChem Lite v0.1.0
[M-H]-206.7509893
predicted
DarkChem Lite v0.1.0
[M-H]-174.309724
predicted
DarkChem Standard v0.1.0
[M-H]-207.5303893
predicted
DarkChem Lite v0.1.0
[M-H]-175.51314
predicted
DeepCCS 1.0 (2019)
[M+H]+179.5328
predicted
DeepCCS 1.0 (2019)
[M+Na]+188.37114
predicted
DeepCCS 1.0 (2019)

Targets

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Kind
Protein
Organism
Humans
Pharmacological action
Unknown
General Function
Zinc ion binding
Specific Function
Ligand-activated transcription factor. Receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Has a preference for poly-unsaturated fatty acids, such as gamma-lin...
Gene Name
PPARD
Uniprot ID
Q03181
Uniprot Name
Peroxisome proliferator-activated receptor delta
Molecular Weight
49902.99 Da

Drug created at September 11, 2007 17:49 / Updated at June 12, 2020 16:52